Hidden Markov Models for Bioinformatics

Inhaltsverzeichnis

• 1 Prerequisites in probability calculus.
• 2 Information and the Kullback Distance.
• 3 Probabilistic Models and Learning.
• 4 EM Algorithm.
• 5 Alignment and Scoring.
• 6 Mixture Models and Profiles.
• 7 Markov Chains.
• 8 Learning of Markov Chains.
• 9 Markovian Models for DNA sequences.
• 10 Hidden Markov Models an Overview.
• 11 HMM for DNA Sequences.
• 12 Left to Right HMM for Sequences.
• 13 Derin’s Algorithm.
• 14 Forward—Backward Algorithm.
• 15 Baum—Welch Learning Algorithm.
• 16 Limit Points of Baum-Welch.
• 17 Asymptotics of Learning.
• 18 Full Probabilistic HMM.